103 lines
3.6 KiB
Bash
Executable File
103 lines
3.6 KiB
Bash
Executable File
#!/usr/bin/env bash
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USAGE="Jupyterlab portable helper
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Implemented by Pierre Saunders, 2023
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USAGE: $0 FLAG
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Available flags:
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i, -i, install, --install Install Jupyterlab locally to the script.
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k, -k, kernel, --kernel Install the R kernel extension to jupyter
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u, -u, update, --update Update every python packages of the local virtual environnement.
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U, -U, uninstall, --uninstall Uninstall Jupyterlab locally to the script.
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l, -l, launch, --launch Launch Jupyterlab locally to the script (Require installation beforehand).
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t, -t, tensorboard, --tensorboard Launch Tensorboard locally to the script (Require installation beforehand).
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h, -h, help, --help Which display this help message."
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VENV_PATH=./venv
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JUPYTER_ROOT_PATH=./jupyter
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TENSORBOARD_LOG_DIR=./logs
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export R_LIBS_SITE=./libs
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export JUPYTER_ALLOW_INSECURE_WRITES=0
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export JUPYTERLAB_SETTINGS_DIR="$JUPYTER_ROOT_PATH"/settings
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export JUPYTERLAB_WORKSPACES_DIR="$JUPYTER_ROOT_PATH"/workspace
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export JUPYTER_CONFIG_DIR="$JUPYTER_ROOT_PATH"/config
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export JUPYTER_RUNTIME_DIR="$JUPYTER_ROOT_PATH"/runtime
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export JUPYTER_DATA_DIR="$JUPYTER_ROOT_PATH"/data
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enable_venv(){
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test ! -d "$VENV_PATH" && echo 'Python virtual environnement not installed' && exit 1
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case "$1" in
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--windows|-W) ENV_PATH="$VENV_PATH"/Scripts/activate ;;
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'') ENV_PATH="$VENV_PATH"/bin/activate ;;
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*) echo 'Invalid selected OS' && exit 1 ;;
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esac
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test ! -f "$ENV_PATH" && echo 'Installation is corrupted, please reinstall' && exit 1
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. "$ENV_PATH"
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}
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case "$1" in
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i|-i|install|--install)
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python -m venv "$VENV_PATH"
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mkdir -p "$JUPYTER_ROOT_PATH"/{settings,workspace,config,runtime,data} "$JUPYTERLAB_SETTINGS_DIR"/@jupyterlab/{notebook-extension,extensionmanager-extension,apputils-extension}
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# Setting it to zero doesn't have the expected result, therefore, let's set it to an abnormally large number.
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echo '{ "maxNumberOutputs": 10000000000 }' > "$JUPYTERLAB_SETTINGS_DIR"/@jupyterlab/notebook-extension/tracker.jupyterlab-settings
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echo '{ "disclaimed": true }' > "$JUPYTERLAB_SETTINGS_DIR"/@jupyterlab/extensionmanager-extension/plugin.jupyterlab-settings
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echo '{ "theme": "JupyterLab Dark" }' > "$JUPYTERLAB_SETTINGS_DIR"/@jupyterlab/apputils-extension/themes.jupyterlab-settings
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echo '{ "fetchNews": "false" }' > "$JUPYTERLAB_SETTINGS_DIR"/@jupyterlab/apputils-extension/notification.jupyterlab-settings
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enable_venv "$2"
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python -m pip install --timeout 120 --retries 10000000000 -U pip setuptools
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pip install --timeout 120 --retries 10000000000 -r requirements.txt
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;;
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k|-k|kernel|--kernel)
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enable_venv "$2"
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mkdir -pv "$R_LIBS_SITE"
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if command -v Rscript >> /dev/null; then
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Rscript -e 'install.packages("IRkernel",repos="http://cran.r-project.org");library(IRkernel);IRkernel::installspec()'
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else
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echo "R isn't installed"
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exit 1
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fi
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;;
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c|-c|check|--check)
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enable_venv "$2"
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pip check
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;;
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u|-u|update|--update)
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enable_venv "$2"
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python -m pip install -U pip
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pip freeze | xargs -n1 pip install -U
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;;
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U|-U|uninstall|--uninstall)
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rm -rfv "$VENV_PATH" "$JUPYTER_ROOT_PATH" "$R_LIBS_SITE" .ipynb_checkpoints __pycache__
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;;
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l|-l|launch|--launch)
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enable_venv "$2"
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if command -v jupyter >> /dev/null; then
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exec jupyter lab --ip 0.0.0.0 --ServerApp.iopub_data_rate_limit 1e16
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else
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echo "Jupyter lab isn't installed"
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exit 1
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fi
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;;
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t|-t|tensorboard|--tensorboard)
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enable_venv "$2"
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if command -v tensorboard >> /dev/null; then
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tensorboard --logdir="$TENSORBOARD_LOG_DIR"
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else
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echo "Tensorboard isn't installed"
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exit 1
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fi
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;;
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h|-h|help|--help) echo "$USAGE" ;;
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*) echo "$USAGE" && exit 1 ;;
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esac
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